Supplementary Table 1. The DEGs related-ZNFs in bladder cancer. upregulated gene logFC pValue downregulated gene logFC pValue MEX3A 2.675006749 1.92E-08 ZNF4 -0.500217308 0.000314883 MCM2 2.376923505 1.47E-09 XPA -0.500799532 1.42E-06 UHRF1 2.268208976 7.30E-11 SALL2 -0.507105013 0.018636098 ZNF488 2.056177177 3.58E-05 OSR2 -0.510232193 0.002486823 DNMT3B 1.981223614 1.56E-08 MBNL3 -0.511064129 6.15E-05 TCF19 1.896173639 6.65E-08 JMJD1C -0.517583571 0.000226283 ZNF117 1.832594913 0.000163967 UBR1 -0.538879047 4.53E-05 TRIM17 1.716834084 4.28E-05 ZFP2 -0.549582068 2.94E-06 ZBED2 1.708716428 0.003394129 GLI2 -0.55011455 3.56E-06 ZNF432 1.668567856 2.10E-05 PCGF5 -0.559318013 0.000167728 ZNF114 1.614196 1.06E-07 CASZ1 -0.560198837 1.67E-05 POLD1 1.612485262 1.75E-10 ZNF671 -0.561627211 0.000146325 HIC2 1.564437793 0.000605763 RNF11 -0.562925151 3.79E-07 RACGAP1 1.528314362 1.04E-07 ZXDB -0.565006226 1.08E-05 SP6 1.524757292 0.004562588 ZRANB1 -0.565798229 9.27E-06 ZNF761 1.52352829 1.53E-07 RORB -0.573904099 4.54E-09 ZIC2 1.419025065 7.10E-05 THAP2 -0.574166626 1.25E-05 TRAIP 1.409906449 7.57E-10 SNAI1 -0.577205831 0.002798337 ZNF692 1.406947003 4.53E-07 RORA -0.57751106 1.82E-07 PARP12 1.396755119 3.71E-07 ZNF438 -0.577936003 4.28E-05 PCGF2 1.384920782 3.83E-09 EBF4 -0.585698645 0.000926479 SALL4 1.359158659 1.89E-08 LONRF3 -0.587221739 0.000450936 PLEKHF1 1.358282346 0.007009509 ZMAT1 -0.587883659 1.25E-05 RNF186 1.353852155 0.028122286 BCL6B -0.61011076 0.001344958 DNMT1 1.315611835 4.59E-08 ZBTB38 -0.618045943 0.001226498 ZSCAN16 1.30119562 2.40E-06 RNF152 -0.618294734 0.001024803 TRIM24 1.296290662 0.000192051 PYGO1 -0.61841571 7.75E-05 DBF4 1.287040238 3.38E-10 KLF13 -0.645955576 3.27E-05 SMYD2 1.28017045 2.39E-09 TSHZ2 -0.646503112 2.81E-07 TRIT1 1.270789443 3.43E-07 FOXP1 -0.648031082 2.28E-05 BRCA1 1.256592515 6.53E-09 NR3C1 -0.65309443 5.46E-05 NEIL3 1.243322051 2.41E-08 DZIP1 -0.661139978 4.95E-05 VAV2 1.216797207 2.19E-05 KLF12 -0.661287122 0.000221299 RNF213 1.215073573 3.16E-05 PHF1 -0.663577633 8.49E-06 CIT 1.193761885 2.07E-08 TRIM2 -0.664022782 0.000245473 DTX3L 1.171095538 1.13E-06 ZSCAN18 -0.67319944 0.000266181 ZMYND19 1.156032949 6.79E-08 ZC3H12C -0.674924771 1.65E-06 TRAF2 1.155106146 5.71E-09 PRKCA -0.684766982 0.008626186 ZNF468 1.153071593 1.25E-06 RNF145 -0.708984598 3.56E-06 ANAPC11 1.150666315 1.26E-08 CLIP1 -0.72210079 0.000290634 ZNF92 1.148799468 1.85E-08 ZMYND11 -0.722172205 0.000105138 ZNF600 1.138473433 2.73E-06 ZHX2 -0.724364624 7.04E-07 RFWD3 1.132935242 1.63E-08 EBF2 -0.724860351 1.16E-07 ZNF107 1.132012304 2.01E-06 SNAI3 -0.725683944 0.004787247 GATA3 1.126530932 0.009144453 ZNF154 -0.743514717 2.07E-07 PCGF1 1.12555034 3.68E-11 KLF11 -0.745431305 0.0025338 SNRPC 1.123859421 4.81E-09 GLI1 -0.747618301 2.63E-06 MTMR4 1.112264553 2.20E-07 ZNF521 -0.750497206 3.37E-06 MEX3D 1.105999062 6.14E-07 ACAP1 -0.777386476 0.029896311 NR2F6 1.105743852 1.45E-05 TSHZ1 -0.77969318 4.27E-07 ZNF706 1.095789833 3.69E-06 ZNF331 -0.780470968 0.000179503 APEX2 1.067997339 2.74E-08 PRKD1 -0.781276365 0.000236568 ZNF205 1.054403262 1.46E-08 EBF3 -0.786163339 2.02E-08 GIT1 1.041612313 3.75E-09 MYRIP -0.789202446 3.72E-10 ZNHIT2 1.035692446 1.05E-06 RNF38 -0.79520273 0.000233092 PCGF3 1.015991028 4.01E-06 LONRF1 -0.797550856 3.46E-06 VAV3 1.003962987 0.00418993 PEG3 -0.801406363 2.84E-09 POLE 1.002305992 3.01E-09 OSR1 -0.803243658 0.000111859 PYGO2 1.002119908 4.15E-09 RASA3 -0.807283389 4.87E-05 FBXO5 0.999449365 6.38E-07 RARB -0.813939134 2.24E-05 RAD18 0.994196808 7.91E-09 DGKB -0.817704437 3.67E-08 ZNF841 0.992887336 5.50E-05 AR -0.828035397 5.69E-06 TRIM65 0.992851294 8.20E-08 TRPS1 -0.843526032 6.93E-06 RNF207 0.992811207 7.87E-05 AKAP13 -0.867879185 1.12E-07 FANCL 0.99131972 2.01E-07 MID2 -0.869521512 7.04E-07 ZNF93 0.981802502 6.45E-06 RUNX1T1 -0.883925142 1.04E-07 FBXL19 0.980807748 1.03E-06 KLF15 -0.884943446 5.37E-05 ZNF296 0.975442748 0.000396632 ZNF25 -0.89907706 1.57E-05 ARFGAP1 0.974395965 2.34E-09 CALCOCO1 -0.902086092 9.59E-07 ZNF74 0.973487258 3.67E-08 HIC1 -0.907048125 2.60E-08 SHARPIN 0.968110806 7.07E-09 RXRG -0.908076619 1.46E-12 PRKCZ 0.965111779 4.76E-07 REV3L -0.921958264 2.42E-06 GLI4 0.964595653 4.14E-05 PGR -0.932816196 4.46E-11 SCNM1 0.961565257 7.01E-08 ZFHX4 -0.933443633 1.28E-05 MAZ 0.96113159 4.27E-07 KLF17 -0.935469946 0.003317781 DBF4B 0.96019805 4.26E-10 ROCK1 -0.943411479 0.000631547 ADAP1 0.956785618 0.001812496 CREB5 -0.958545205 3.08E-09 POLR2K 0.948372709 2.56E-06 FBXO30 -0.964216459 9.50E-05 CBLC 0.945817435 0.000409324 ZHX3 -0.968258201 1.46E-06 CXXC5 0.940652208 0.003488115 KLF10 -0.972396168 7.81E-05 TRIM11 0.939869924 3.71E-07 ROCK2 -0.989766498 0.000419966 RNF208 0.923659872 0.005106445 ZFP36L1 -0.999585527 6.20E-07 ZFYVE19 0.919626612 1.85E-08 STAC -1.002330192 6.87E-06 TTF2 0.918688057 1.35E-08 UTRN -1.002685066 5.27E-08 ZNF121 0.917485894 0.000117165 DGKG -1.021329388 2.56E-06 ZNF682 0.905290815 0.000211639 MBNL1 -1.023838709 4.61E-05 STAC3 0.904801866 4.84E-06 PRDM8 -1.03681706 2.05E-07 RNFT2 0.895222538 3.75E-08 ZBTB4 -1.097670091 2.52E-08 ZSWIM4 0.885936865 2.42E-05 RNF112 -1.115108756 4.87E-11 TRMT1 0.885346756 6.70E-07 FHL5 -1.157483528 5.97E-09 TRIM45 0.877093113 0.000199374 ZBTB47 -1.173461591 1.09E-06 ZNF581 0.875124369 7.83E-07 RNF180 -1.195702392 4.39E-09 ZNF524 0.87343688 6.45E-06 CDC42BPA -1.212552046 1.96E-05 RBCK1 0.872921012 5.05E-07 NEURL1B -1.218639049 6.06E-05 ZC3H3 0.872513354 1.19E-09 ZEB2 -1.218970787 1.70E-08 ZNF43 0.872257292 0.001017959 BNC2 -1.240017457 9.87E-07 XAF1 0.872158507 0.02947116 FOXP2 -1.286811743 1.59E-08 CPSF4 0.869396903 1.72E-08 LONRF2 -1.301430363 1.79E-06 SF3A2 0.868531542 3.12E-08 PRDM1 -1.338267939 0.021996996 TRAF4 0.865504771 0.002270772 THRA -1.378293527 1.09E-07 ZNF133 0.860983643 2.36E-08 TNFAIP3 -1.40307945 0.000101131 PHF6 0.860711588 8.79E-06 PRKCB -1.43565929 5.41E-10 ZNF675 0.859660333 7.31E-06 CDKN1A -1.456050322 0.000250963 ZNF579 0.856674515 8.38E-05 ZFPM2 -1.472757888 1.25E-06 ZNF697 0.855584697 6.51E-07 KLF6 -1.490462565 2.95E-07 EIF2S2 0.852037147 1.35E-07 ESR1 -1.491993405 1.53E-07 TRIM28 0.851252728 3.33E-07 TSHZ3 -1.492144006 1.13E-07 ZMYND8 0.850277489 0.000270118 NR2F1 -1.528054148 5.84E-09 HGS 0.850049384 3.55E-08 ZBTB16 -1.576640536 3.38E-10 ZNF813 0.846902189 8.72E-06 JAZF1 -1.589208623 5.85E-07 DNMT3A 0.843972768 4.23E-06 PJA2 -1.61662911 1.96E-08 ZNF707 0.843075038 3.66E-09 RASGRP2 -1.628760196 3.05E-09 ZNF480 0.841293809 4.04E-06 EBF1 -1.639280051 2.78E-10 GTF3A 0.83329533 1.63E-06 FYCO1 -1.696648936 8.06E-07 RNF181 0.833183117 2.44E-07 TRIM63 -1.72699163 0.000486418 RP9 0.832056734 1.44E-08 RNF122 -1.795315935 5.99E-08 ZNF681 0.824974805 3.98E-05 TIPARP -1.883178738 1.54E-06 MTF2 0.819617564 8.64E-08 SOBP -1.962208057 5.61E-10 ZNF436 0.816733887 0.008204934 RNF150 -2.024683041 4.50E-09 WRNIP1 0.815366214 3.23E-07 NR3C2 -2.065187605 1.83E-10 TRIM59 0.814007459 2.21E-09 EGR2 -2.100425526 1.02E-08 ZNF91 0.810883437 0.027290473 GATA6 -2.285108523 6.68E-11 DGKZ 0.810859973 5.46E-07 ZEB1 -2.295470843 1.97E-07 ZNF83 0.809879943 0.001552595 ZCCHC24 -2.339659728 6.88E-10 ZNF69 0.802001592 0.005047016 KLF4 -2.352227376 5.32E-11 SMYD5 0.79812591 2.93E-08 KLF9 -2.39599476 3.04E-11 ZBTB33 0.798013769 6.01E-06 PDZRN3 -2.427010368 5.96E-10 ZNHIT1 0.797550781 3.23E-07 GATA5 -2.48990005 8.51E-10 TRIM27 0.793673437 2.03E-06 DTNA -2.507679087 6.11E-08 RNFT1 0.791790692 6.17E-06 DMD -2.5685776 3.75E-08 ZNF687 0.789863612 3.49E-06 KLF2 -2.688620805 4.75E-12 ZNF195 0.782759373 8.38E-05 NR4A2 -2.756656584 1.56E-10 ESCO2 0.781639659 1.31E-07 ZFP36 -2.87165072 3.96E-10 ZNF28 0.781309944 1.46E-05 PDZRN4 -2.956833448 1.72E-09 ZNF702P 0.773126997 0.003841696 EGR3 -3.232674652 7.66E-12 RNF144A 0.770347626 0.001847655 NR4A3 -3.335272363 5.29E-12 FOXP4 0.768845711 2.96E-06 EGR1 -3.350345551 1.41E-11 ZNF253 0.766606116 0.000526722 NR4A1 -3.807149879 2.15E-12 ZBED4 0.758853136 2.14E-06 FHL1 -4.109546023 4.81E-11 ZNF341 0.756596648 2.54E-08 PML 0.755334677 0.001110323 ZNF700 0.754167403 5.96E-05 NFXL1 0.752374319 3.69E-06 ZNF260 0.750332279 2.23E-05 NPLOC4 0.747519416 5.22E-08 POLR1B 0.7474385 3.46E-06 RAPSN 0.745522555 0.00014193 ZBTB12 0.742289238 0.001944498 NHLRC1 0.742102992 0.001186581 ZSWIM1 0.73748234 5.05E-07 ZFP62 0.736840089 0.000299242 ZNF623 0.73469872 2.72E-05 AGAP2 0.733206653 0.002921813 RNF126 0.731219913 4.53E-05 ZKSCAN4 0.728691243 3.98E-07 AGAP6 0.727410616 2.17E-05 PIAS3 0.727289812 0.000454147 ZNF696 0.727210134 1.36E-08 PLAGL2 0.725425293 0.000653809 POLR2I 0.72405846 5.69E-06 ZNF254 0.722903572 0.003888112 ZMIZ2 0.721927156 8.72E-06 ZNF85 0.721840711 1.27E-05 ZNF587 0.720095158 8.38E-05 DDX41 0.7193611 7.39E-08 ZNF544 0.717803988 4.57E-07 ZNHIT3 0.715467704 2.93E-08 ZNF787 0.713714958 1.47E-06 ZNF691 0.710421518 1.06E-05 TRIM25 0.709749343 0.000568919 MZF1 0.70949469 0.000348488 CYHR1 0.708705991 3.52E-05 ZSCAN2 0.708294007 1.44E-06 ZNF3 0.705184164 3.34E-06 GMIP 0.703159857 0.002994584 ZNF823 0.698693648 0.021887879 INO80B 0.6972189 1.70E-05 DTX2 0.696074761 0.000227968 POLR3K 0.695704787 1.60E-06 GATAD2A 0.695227299 1.04E-07 ZNF320 0.691466326 0.007890124 ZNF266 0.690347722 0.001969426 SYVN1 0.688538816 8.47E-08 ZNF664 0.685984538 0.000504954 CXXC1 0.68594497 0.002994584 TOP3A 0.684673568 1.46E-06 SUZ12 0.681530234 3.58E-05 ZNF485 0.681022859 2.03E-07 DTNB 0.679236795 0.003106844 RNF135 0.67581958 4.27E-06 ZNF695 0.675584787 3.96E-10 ZNF124 0.675357367 6.20E-05 ZFP64 0.675217406 2.01E-06 ZNF146 0.670326516 0.000101921 RNF7 0.669308309 2.93E-08 E4F1 0.66820686 1.40E-06 ZNF530 0.666226453 5.97E-09 ZNF607 0.665195893 0.000128495 ZNF350 0.663234066 0.002798337 ZNF606 0.661986776 8.20E-06 PLEKHF2 0.660512951 0.001426593 ZNF514 0.659877003 4.76E-05 ANKZF1 0.659788171 3.95E-05 AGAP3 0.652356713 0.000405237 SMYD3 0.651866054 0.00154255 PRKCI 0.649794692 0.000366522 TRIM7 0.649378552 0.025373976 PRKD2 0.649352177 7.87E-05 KDM5B 0.647150671 0.001614139 ZNF473 0.645167574 7.01E-08 ZNF616 0.645079029 7.71E-06 MKRN2 0.644827183 0.00236542 USP39 0.6446915 7.24E-08 ZNF749 0.642712427 5.35E-07 ZNF714 0.638262677 0.001210385 THAP3 0.638103035 2.74E-05 ZNF282 0.637964587 5.25E-06 ZNF618 0.63570174 0.003013033 RNF8 0.63018739 3.71E-08 FEZF1 0.629216083 0.004749893 ZNF789 0.629181958 2.37E-06 ZNF526 0.628536261 1.27E-07 TNIP2 0.627772776 7.37E-06 PATZ1 0.626624841 0.028774131 HLTF 0.626111485 0.004787247 RNF2 0.622252021 5.91E-05 PIAS4 0.619028836 1.39E-07 CDC42BPG 0.618857949 0.014209385 MORC4 0.617230794 0.001259321 OVOL2 0.614155696 0.007313359 APTX 0.613519036 3.06E-05 ZNF431 0.61325052 0.000101132 RBM10 0.612743134 2.80E-06 RBM4B 0.609837434 2.83E-06 ZNF593 0.605960099 8.19E-05 ZNF558 0.605391491 0.001140266 ZNF610 0.602692995 0.009685172 ZC3HC1 0.602556337 4.53E-07 ZNF845 0.597697666 9.11E-06 ZNF22 0.59754099 0.000149704 ZNF772 0.597156909 0.000130481 ZNRD1 0.59480713 0.000808947 MTA1 0.594786053 4.91E-05 SLC2A4RG 0.59433474 0.007049425 TUT1 0.592039299 2.06E-05 ZNF572 0.591823888 0.000147443 ZNF701 0.58715017 2.59E-05 HDAC6 0.587034956 0.000133515 MTA2 0.586750409 0.0004383 ZNF224 0.585671176 5.59E-05 RNF26 0.58490012 0.000883652 ADNP 0.582684815 0.000165212 ZBTB17 0.582374183 7.39E-07 RPL37 0.58171904 0.004675727 GTF2E1 0.579151633 6.01E-06 ZNF443 0.578207284 0.007292769 ZNF786 0.576122865 7.33E-05 ZNF354A 0.574720498 0.000425996 ZNF7 0.574638094 1.99E-07 PRR3 0.571712778 0.0002802 ZFP41 0.571644796 8.00E-05 RNF34 0.570006679 3.02E-06 RAF1 0.5688083 0.005076652 ZNF513 0.567176791 0.00368318 ZNF273 0.564877891 4.68E-05 ZNF574 0.564675894 1.18E-05 ZFAND2A 0.560766015 0.000895697 RBX1 0.55862897 1.16E-05 MORC2 0.556472278 0.000110998 RNF113A 0.553727134 0.000154323 DCLRE1A 0.551914737 0.000268143 ZNF335 0.5503735 4.31E-06 ZNF444 0.54978094 0.000848411 PRMT3 0.547585961 4.25E-05 GTF2H3 0.547006329 0.000182223 ZNF232 0.546359059 0.002380293 ZNF433 0.544131422 0.001464321 LYAR 0.542617779 0.003552068 MBTD1 0.541287888 0.005381781 PLAG1 0.541027127 0.005136396 REPIN1 0.539380611 0.0120273 RNF114 0.539119693 0.000240093 ZNF385C 0.539050912 1.93E-05 RNF149 0.537969585 0.005319462 ZNF207 0.537621059 8.34E-06 ZNF184 0.537414052 0.001318719 ZMYM1 0.533737117 4.76E-05 ZC3H8 0.532491686 1.11E-05 NSMCE2 0.53185985 1.00E-05 FIZ1 0.530885029 1.17E-05 ZNF180 0.530200948 0.000114483 ZIC5 0.527185441 9.01E-05 ZC3H18 0.524924026 4.01E-06 ZNF217 0.524544128 0.016653383 TRAFD1 0.522789783 0.003488117 ZNF556 0.519990891 1.82E-05 ZNF764 0.519526177 1.44E-05 ZNF414 0.518171177 0.000236568 ZNF837 0.517862347 0.002111853 ANKIB1 0.515782739 0.000473869 ZNF550 0.515232671 0.000305854 TMEM129 0.514461101 0.024043612 ZNF768 0.512094705 0.003262493 UPF1 0.511819215 9.05E-07 ZNF428 0.511353107 0.003467034 ZNF284 0.509721847 3.07E-07 ZNF165 0.508268278 0.000345981 SP140L 0.508025382 0.004539638 ZNF613 0.50794074 0.002549639 EWSR1 0.507358142 5.45E-06 DUS3L 0.506775621 0.000526722 ZNF419 0.506265036 1.67E-07 TRAF7 0.505088736 0.000333695 CBFA2T2 0.504777091 0.015171449 ZNF182 0.504212436 0.000333695 ZNF765 0.504178748 5.79E-07 ZNF680 0.503065889 0.008023694 ZNF213 0.502247872 8.32E-05 RNF215 0.500741426 8.34E-06