Research Paper Volume 16, Issue 2 pp 1161—1181

A circRNA ceRNA network involved in cognitive dysfunction after chronic cerebral hypoperfusion

Wan-Rong Jiang1,2, *, , Yong-Ming Zhou1, *, , Wei Wu3, *, , Li-Jie Yang1, , You Wu1, , Xin-Yuan Zhang1, , Zhao-Hui Yao1,2, ,

  • 1 Department of Geriatrics, Renmin Hospital of Wuhan University, Wuhan, China
  • 2 Henan Key Laboratory of Neurorestoratology, The First Affiliated Hospital of Xinxiang Medical University, Xinxiang, Henan, China
  • 3 Department of Clinical Laboratory, Renmin Hospital of Wuhan University, Wuhan, China
* Co-first author

Received: August 30, 2023       Accepted: November 21, 2023       Published: January 16, 2024      

https://doi.org/10.18632/aging.205387
How to Cite

Copyright: © 2024 Jiang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Abstract

Chronic Cerebral Hypoperfusion (CCH) is associated with cognitive dysfunction, the underlying mechanisms of which remain elusive, hindering the development of effective therapeutic approaches. In this study, we employed an established CCH animal model to delve into neuropathological alterations like oxidative stress, inflammation, neurotransmitter synthesis deficits, and other morphological alterations. Our findings revealed that while the number of neurons remained unchanged, there was a significant reduction in neuronal fibers post-CCH, as evidenced by microtubule-associated protein 2 (MAP2) staining. Moreover, myelin basic protein (MBP) staining showed exacerbated demyelination of neuronal fibers. Furthermore, we observed increased neuroinflammation, proliferation, and activation of astrocytes and microglia, as well as synaptic loss and microglial-mediated synapse engulfment post-CCH. Utilizing RNA sequencing, differential expression analysis displayed alterations in both mRNAs and circRNAs. Following gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses, both showed significant enrichment in immunological and inflammation-related terms and pathways. Importantly, the differentially expressed circular RNAs (DE circRNAs) exhibited a notable coexpression pattern with DE mRNAs. The ternary circRNA-miRNA-mRNA competing endogenous RNAs (ceRNA) network was constructed, and subsequent analysis reiterated the significance of neuroimmunological and neuroinflammatory dysfunction in CCH-induced neuropathological changes and cognitive dysfunction. This study underscores the potential role of circRNAs in these processes, suggesting them as promising therapeutic targets to mitigate the detrimental effects of CCH.

Abbreviations

CCH: cerebral chronic hypoperfusion; CNS: central nervous system; MAP2: microtubule-associated protein 2; MBP: myelin basic protein; GO: Gene Ontology; KEGG: Kyoto Encyclopedia of Genes and Genomes; circRNA: circular RNA; miRNA: microRNA; ceRNA: competing endogenous RNA; DE mRNA: differentially expressed mRNA; DE circRNA: differentially expressed circRNA; NRF2: nuclear factor erythroid 2-related factor 2; ARE: anti-oxidative response element; circHIPK3: circular RNA Homeodomain Interacting Protein Kinase 3; circBIRC6: circular RNA Baculoviral IAP Repeat Containing Protein 6; CDK: cyclin-dependent kinases; MHC: major histocompatibility complex; DAPI: diamidino-phenyl-indole; PBS: phosphate buffer solution; GFAP: glial fibrillary acidic protein; SEM: standard error of the mean; qRT-PCR: quantitative real-time PCR; FPKM: the fragments per kilobase million; RPM: per kilobase million.